(§) corresponding or co-corresponding author
2016
E. Duchardt-Ferner, S.R. Gottstein-Schmidtke, J.E. Weigand, O. Ohlenschlager, J.-P. Wurm, C. Hammann, B. Suess, J. °Âö³ó²Ô±ð°ù³Ù§ (2016) What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
2015
C. Hacker, N.A. Christ, E. Duchardt-Ferner, S. Korn, L. Berninger, P. Kotter, K.-D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. (2015) NMR resonance assignments of the lantibiotic immunity protein NisI from Lactococcus lactis.
C. Hacker, N.A. Christ, E. Duchardt-Ferner, S. Korn, C. Gobl, L. Berninger, S. Dusterhus, U.A. Hellmich, T. Madl, P. Kotter, K.-D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§ (2015) The Solution Structure of the Lantibiotic Immunity Protein NisI and Its Interactions with Nisin.
A.C. Wolter, E. Duchardt-Ferner, A.H. Nasiri, K. Hantke, C.H. Wunderlich, C. Kreutz, J. Wohnert (2015) NMR resonance assignments for the class II GTP binding RNA aptamer in complex with GTP. Issue 2,
D. Chatterjee, D. Kudlinzki, V. Linhard, K. Saxena, U. Schieborr, S. L. Gande, J.P. Wurm, J. °Âö³ó²Ô±ð°ù³Ù, R. Abele, V. V. Rogov, V. Dötsch, H. D. Osiewacz, S. Sreeramulu, H. Schwalbe. Structure and Biophysical Characterization of the S-Adenosylmethionine-dependent O-Methyltransferase PaMTH1, a Putative Enzyme Accumulating during Senescence of Podospora anserina.
C. Hacker, N.A. Christ, E. Duchardt-Ferner, S. Korn, L. Berninger, P. Kötter, K.-D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. NMR resonance assignments of the lantibiotic immunity protein NisI from Lactococcus lactis.
2014
J. E. Weigand, S. R. Gottstein-Schmidtke, S. Demolli, F. Groher, E. Duchardt-Ferner, J. °Âö³ó²Ô±ð°ù³Ù, B. Suess. Sequence Elements Distal to the Ligand Binding Pocket Modulate the Efficiency of a Synthetic Riboswitch.
S. R. Gottstein-Schmidtke, E. Duchardt-Ferner, F. Groher, J. E. Weigand, D. Gottstein, B. Suess, J. °Âö³ó²Ô±ð°ù³Ù§. Building a stable RNA U-turn with a protonated cytidine.
S. Nozinovic, A. Reining, Y.-B. Kim, J. Noeske, K. Schlepckow, J. °Âö³ó²Ô±ð°ù³Ù, H. Schwalbe. The importance of helix P1 stability for structural pre-organization and ligand binding affinity of the adenine riboswitch aptamer domain.
J. P. Wurm, A. Lioutikov, P. Kötter, K.-D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. Backbone and side chain NMR assignments for the ribosome assembly factor Nop6 from Saccharomyces cerevisiae.
2013
U. A. Hellmich, B. L. Weis, A. Lioutikov, J. P. Wurm, M. Kaiser, N. A Christ, K. Hantke, P. Kötter, K.-D. Entian, E. Schleiff, J. °Âö³ó²Ô±ð°ù³Ù§. Essential ribosome assembly factor Fap7 regulates a hierarchy of RNA-protein interactions during small ribosomal subunit biogenesis.
L. Steimer, J. P. Wurm, M. H. Linden, M. G. Rudolph, J. °Âö³ó²Ô±ð°ù³Ù§, D. Klostermeier. Recognition of two distinct elements in the RNA substrate by the RNA-binding domain of the T. thermophilus DEAD box helicase Hera.
L.-K. Maier, S. J. Lange, B. Stoll, K. A. Haas, S. Fischer, E. Fischer, E. Duchardt-Ferner, J. °Âö³ó²Ô±ð°ù³Ù, R. Backofen, A. Marchfelder. Essential requirements for the detection and degradation of invaders by the Haloferax volcanii CRISPR/Cas system I-B.
K. Abarca-Heidemann, E. Duchardt-Ferner, J. °Âö³ó²Ô±ð°ù³Ù, B. S. Rothberg. Isotope labeling strategies for analysis of an ion channel cytoplasmic domain by NMR spectroscopy. .
U. A. Hellmich, J. °Âö³ó²Ô±ð°ù³Ù§. Backbone resonance assignments for a homolog of the essential ribosome biogenesis factor Fap7 from P. horikoshii in its nucleotide-free and -bound forms.
2012
Q. Zhou, A. Dowling, H. Heide, J. °Âö³ó²Ô±ð°ù³Ù, U. Brandt, J. Baum, R. Ffrench-Constant, H. B. Bode. Xentrivalpeptides A-Q: depsipeptide diversification in Xenorhabdus.
N. A. Christ, S. Bochmann, D. Gottstein, E. Duchardt-Ferner, U. A. Hellmich, S. Düsterhus, P. Kötter, P. Güntert, K.-D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. The First structure of a lantibiotic immunity protein, SpaI from Bacillus subtilis, reveals a novel fold.
A. Wacker, J. Buck, C. Richter, H. Schwalbe, J. °Âö³ó²Ô±ð°ù³Ù§. Mechanisms for differentiation between cognate and near-cognate ligands by purine riboswitches.
J. P. Wurm, M. Griese, U. Bahr, M. Heldt, A. Heckel, M. Karas, J. Soppa, J. °Âö³ó²Ô±ð°ù³Ù§. Identification of the enzyme responsible for N1-methylation of pseudouridine 54 in archaeal tRNAs.
T. Veith, R. Martin, J. P. Wurm, B. Weis, E. Duchardt-Ferner, C. Safferthal, R. Hennig, O. Mirus, M. T. Bohnsack, J. °Âö³ó²Ô±ð°ù³Ù§, E. Schleiff. Structural and functional analysis of the archaeal endonuclease Nob1. (selected as cover picture).
U. A. Hellmich, E. Duchardt-Ferner, C. Glaubitz, J. °Âö³ó²Ô±ð°ù³Ù§. Backbone NMR resonance assignments of the nucleotide binding domain of the ABC multidrug transporter LmrA from Lactococcus lactis in its ADP-bound state.
T. Veith, J. P. Wurm, E. Duchardt-Ferner, B. Weis, R. Martin, C. Safferthal, M. T. Bohnsack, E. Schleiff, J. °Âö³ó²Ô±ð°ù³Ù§.Backbone and side chain NMR resonance assignments for an archaeal homolog of the endonuclease Nob1 involved in ribosome biogenesis.
N. A. Christ, E. Duchardt-Ferner, S. Düsterhus, P. Kötter, K.-D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. NMR resonance assignment of the autoimmunity protein SpaI from Bacillus subtilis ATCC 6633.
2011
J. Buck, A. Wacker, E. Warkenthin, J. °Âö³ó²Ô±ð°ù³Ù§, J. Wirmer-Bartoschek, H. Schwalbe. Influence of ground-state structure and Mg2+ binding on folding kinetics of the guanine-sensing riboswitch aptamer domain.
E. Duchardt-Ferner, J. Ferner, J. °Âö³ó²Ô±ð°ù³Ù§. Rapid identification of noncanonical RNA structure elements by direct detection of OH...O-P, NH...O-P, and NH2...O-P hydrogen bonds in solution NMR-spectroscopy. (Selected as back cover)
A. Wacker, J. Buck, D. Mathieu, C. Richter, J. °Âö³ó²Ô±ð°ù³Ù§, H. Schwalbe. Structure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopy.
J. E. Weigand, S. R. Schmidtke, T. J. Will, E. Duchardt-Ferner, C. Hammann, J. °Âö³ó²Ô±ð°ù³Ù, B. Suess. Mechanistic insights into an engineered riboswitch: A switching element which confers riboswitch activity.
B. Meyer, J. P. Wurm, P. Kötter, M. S. Leisegang, V. Schilling, M. Buchhaupt, M. Held, U. Bahr, M. Karas, A. Heckel, M. T. Bohnsack, J. °Âö³ó²Ô±ð°ù³Ù, K.-D. Entian. The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Psi1191 in yeast 18S rRNA. . (Selected as “Featured article")
2010
E. Duchardt-Ferner, J. E. Weigand, S. R. Schmidtke, O. Ohlenschläger, B. Suess, J. °Âö³ó²Ô±ð°ù³Ù§. Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch.
J. Buck, J. Noeske, J. °Âö³ó²Ô±ð°ù³Ù, H. Schwalbe. Dissecting the influence of Mg2+ on 3D architecture and ligand-binding of the guanine-sensing riboswitch aptamer domain.
S. R. Schmidtke, E. Duchardt-Ferner, J. E. Weigand, B. Suess, J. °Âö³ó²Ô±ð°ù³Ù§. NMR resonance assignments of an engineered neomycin-sensing riboswitch RNA bound to ribostamycin and tobramycin.
J. P. Wurm, B. Meyer, U. Bahr, M. Held, O. Frolow, P. Kötter, J. W. Engels, A. Heckel, M. Karas, K. D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. The ribosome assembly factor Nep1 responsible for Bowen-Conradi syndrome is a pseudouridine-N1-specific methyltransferase. (selected as "Featured Article")
2009
J. P. Wurm, E. Duchardt, B. Meyer, B. Z. Leal, P. Kötter, K. D. Entian, J. °Âö³ó²Ô±ð°ù³Ù§. Backbone resonance assignments of the 48 kDa dimeric putative 18S rRNA-methyltransferase Nep1 from Methanocaldococcus jannaschii. Biomol.
A. Villa, J. °Âö³ó²Ô±ð°ù³Ù§, G. Stock. Molecular dynamics simulation study of the binding of purine bases to the aptamer domain of the guanine sensing riboswitch.
J. Ferner, M. Suhartono, S. Breitung, H. R. Jonker, M. Hennig, J. °Âö³ó²Ô±ð°ù³Ù, M. Göbel, H. Schwalbe. Structures of HIV TAR RNA-ligand complexes reveal higher binding stoichiometries.
2008
S. Cuzic, K. Abarca Heidemann, J. °Âö³ó²Ô±ð°ù³Ù and R. Hartmann. Evidence for a rearrangement in Escherichia coli RNase P RNA-substrate complexes before cleavage chemistry.
J. Ferner, A. Villa, E. Duchardt, E. Widjajakusuma, J. °Âö³ó²Ô±ð°ù³Ù, G. Stock and H. Schwalbe. NMR and MD-studies of the temperature dependent dynamics of RNA YNMG-tetraloops.
A. B. Taylor, B. Meyer, B. Z. Leal, V. Schirf, B. Demeler, P. Koetter, P. J. Hart, K.-D. Entian and J. °Âö³ó²Ô±ð°ù³Ù§. The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a preorganized SAM binding site. .
2007
J. Buck, B. Fürtig, J. Noeske, J. °Âö³ó²Ô±ð°ù³Ù and H. Schwalbe. Time-resolved NMR methods resolving ligand-induced RNA folding at atomic resolution. .
J. Noeske, H. Schwalbe and J. °Âö³ó²Ô±ð°ù³Ù§. Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain. .
L. J. Martin, M. Hähnke, M. Nitz., J. °Âö³ó²Ô±ð°ù³Ù, N. R. Silvaggi, K. N. Allen, H. Schwalbe and B. Imperiali. Double-lanthanide-binding tags: design, photophysical properties, and NMR applications. .
H. Schwalbe, J. Buck, B. Fürtig, J. Noeske and J. °Âö³ó²Ô±ð°ù³Ù. Structures of RNA switches: insight into molecular recognition and tertiary structure. .
H. Jonker, S. Ilin, S. Grimm, J. °Âö³ó²Ô±ð°ù³Ù§ and H. Schwalbe. L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy. .
J. Noeske, J. Buck, H. R. Nasiri, B. Fürtig, H. Schwalbe and J. °Âö³ó²Ô±ð°ù³Ù§. Interplay of 'induced fit' and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch. .
2006
E. Ab, A. R. Atkinson, L. Banci, I. Bertini, ...., J. °Âö³ó²Ô±ð°ù³Ù, M. Zweckstetter and R. Kaptein. NMR in the SPINE structural proteomics project. .
J. Noeske, C. Richter, E. Stirnal, H. Schwalbe and J. °Âö³ó²Ô±ð°ù³Ù§. Phosphate group recognition by the aptamer domain of the thiamine pyrophosphate sensing riboswitch. .
2005
H. R. Nasiri, H. Schwalbe, M. Bolte and J. °Âö³ó²Ô±ð°ù³Ù. N-9,N-7-Dimethyl-hypoxanthiniumiodide. Acta Crystallogr. .
S. Ilin, A. Hoskins, O. Ohlenschläger, H. Schwalbe and J. °Âö³ó²Ô±ð°ù³Ù§. Domain reorientation and induced fit upon RNA binding: solution structure and dynamics of ribosomal protein L11 from Thermotoga maritima. .
J. Noeske, C. Richter, M. A. Grundl, H. R. Nasiri, H. Schwalbe and J. °Âö³ó²Ô±ð°ù³Ù§. An intermolecular base triple as the basis of ligand specificity and affinity in the guanine and adenine sensing riboswitch RNAs. .
S. Grimm and J. °Âö³ó²Ô±ð°ù³Ù§. Chemical shift assignments of the ribosome binding factor A – a cold shock protein fromThermotoga maritima. .
2004
E. Duchardt, C. Richter, O. Ohlenschläger, M. Görlach, J. °Âö³ó²Ô±ð°ù³Ù and H. Schwalbe. Determination of the glycosidic bond angle c in RNA from cross-correlated relaxation of CH dipolar coupling and N chemical shift anisotropy. .
O. Ohlenschläger*, J. °Âö³ó²Ô±ð°ù³Ù*, E. Bucci, S. Seitz, S. Häfner, R. Ramachandran, R. Zell and M. Görlach. The structure of the stemloop D subdomain of Coxsackievirus B3 cloverleaf RNA and its interaction with the proteinase 3C. . (* O. O. und J. W. contributed equally)
2003
J. °Âö³ó²Ô±ð°ù³Ù, K. J. Franz, M. Nitz, B. Imperiali and H. Schwalbe. Protein alignment by a coexpressed lanthanide binding tag for the measurement of residual dipolar couplings. .
B. Fürtig, C. Richter, J. °Âö³ó²Ô±ð°ù³Ù and H. Schwalbe. NMR spectroscopy of RNA. Review.
O. Ohlenschläger, J. °Âö³ó²Ô±ð°ù³Ù, R. Ramachandran, C. Sich and M. Görlach. Nuclear magnetic resonance studies of ribonucleic acids. . Review.
J. °Âö³ó²Ô±ð°ù³Ù§, M. Görlach and H. Schwalbe. HCCNH-TOCSY-experiments for the simultaneous correlation of exchangeable and H6/H5 base proton resonances in pyrimidines. .
S. Ilin, A. Hoskins, H. Schwalbe and J. °Âö³ó²Ô±ð°ù³Ù§. NMR assignments and secondary structure identification of the ribosomal protein L11 from Thermotoga maritima. .
2002
B. Schlott, J. °Âö³ó²Ô±ð°ù³Ù, C. Icke, M. Hartmann, R. Ramachandran, K. Gührs, E. Glusa, J. Flemming, M. Görlach, F. Große and O. Ohlenschläger. Interaction of Kazal-type inhibitor domains with serine proteinases: Biochemical and structural studies..
2001
C. K. Smith, J. °Âö³ó²Ô±ð°ù³Ù, R. T. Sauer and H. Schwalbe. Assignments of the 1H, 13C, and 15N resonances of the substrate-binding SSD domain from Lon protease. .
K. Agbaria, J. °Âö³ó²Ô±ð°ù³Ù and S. E. Biali. Extraannular fluorinated calixarenes: regiospecificity of the deoxofluorination reactions of bis(spirodienol) derivatives. .
2000
F. Mueller, I. Sommer, P. Baranov, R. Matadeen, M. Stoldt, J. °Âö³ó²Ô±ð°ù³Ù, M. Görlach, M. van Heel and R. Brimacombe. The 3D arrangement of the 23S and 5S rRNA in the Escherichia coli 50S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 Ã… resolution. .
1999
M. Stoldt*, J. °Âö³ó²Ô±ð°ù³Ù*, O. Ohlenschläger, M. Görlach and L. R. Brown. The NMR structure of the 5S rRNA E-domain–protein L25 complex shows preformed and induced recognition. . (* M. S. und J. W. contributed equally)
J. °Âö³ó²Ô±ð°ù³Ù, A.J. Dingley, M. Stoldt, M. Görlach, S. Grzesiek and L. R. Brown. Direct identification of NH···N hydrogen bonds in non-canonical base pairs of RNA by NMR spectroscopy. .
J. °Âö³ó²Ô±ð°ù³Ù, R. Ramachandran, M. Görlach and L. R. Brown. Triple-resonance experiments for correlation of H5 and exchangeable pyrimidine base hydrogens in 13C,15N labelled RNA.
1998
M. Stoldt*, J. °Âö³ó²Ô±ð°ù³Ù*, M. Görlach and L. R. Brown. The NMR structure of Escherichia coli ribosomal protein L25 shows homology to general stress proteins and glutaminyl-tRNA synthetases. .
J. °Âö³ó²Ô±ð°ù³Ù, J. Brenn, M. Stoldt, O. Aleksiuk, F. Grynszpan, I. Thondorf and S. E. Biali. Conformation and stereodynamics of Monodioxamethylene Calix[4]arene derivatives. .
1997
S. E. Biali, V. Böhmer, J. Brenn, M. Frings, I. Thondorf, W. Vogt and J. °Âö³ó²Ô±ð°ù³Ù. Conformation, inversion barrier, and solvent-induced conformational shift in Exo- and Endo/Exo-Calix[4]arenes. .